Authors :
Ahmar Hasan; Syed Ziaur Rahman
Volume/Issue :
Volume 9 - 2024, Issue 6 - June
Google Scholar :
https://tinyurl.com/42yzjc6v
Scribd :
https://tinyurl.com/3k9ej6t6
DOI :
https://doi.org/10.38124/ijisrt/IJISRT24JUN1923
Note : A published paper may take 4-5 working days from the publication date to appear in PlumX Metrics, Semantic Scholar, and ResearchGate.
Abstract :
Rheumatoid arthritis, or RA, is a type of
chronic inflammatory disorder that is defined by
inflammation of the joints, pain, and joint degeneration.
Thus, although genetic predispositions play a role in RA
development, they are insufficient to explain differences
in the disease’s initiation and activity. Epigenomics,
referring to changes in the phenotype of a gene or group
of genes brought by modification of the DNA molecule
without altering its base sequence, offers important
information on RA’s multifactorial etiology. The present
article aimed at discussing the various epigenetic
features in RA such as DNA methylation, histone
modification, and non-coding RNA. These changes
include, hypomethylation of the pro-inflammatory genes
and hypermethylation of the anti-inflammatory genes
and this promotes inflammation in the body specifically
in RA. Other epigenetic abnormalities causing distortion
of disease pathology include dysregulated histone
modifications and non-coding RNAs. Knowledge of these
epigenetic changes have brought about the intervention
strategies in the form of epigenetic therapies.
Azacitidine, vorinostat and miRNA based therapies are
some of the classes of drugs which demonstrate efficacy
in preclinical and clinical trials. That nevertheless there
are some limitations that researchers are yet to embrace
regarding specificity, delivery, and the true interactions
between epigenetics. It is proposed that the further
research should be concentrated on the development of
precise or pharmacogenomic medicine approaches, the
combination of genetic and epigenetic aspects of the drug
treatment. In this context, the present review of the
epigenetic targets and therapies clearly brings out the
possibilities of im-proving RA management and the
quality of life of patients through epigenetic
interventions.
Keywords :
Rheumatoid Arthritis, Epigenetics, DNA Methylation, Histone Modifications, Non-Coding RNAs, Pro-Inflammatory Genes, Anti-Inflammatory Genes, DNA Methylation Inhibitors, Histone Deacetylase Inhibitors, miRNA-Based Therapies, Autoimmune Disease, Inflammation, Gene Expression, Personalized Medicine, Epigenetic Therapies.
References :
- Alamanos Y, Drosos AA. Epidemiology of adult rheumatoid arthritis. Autoimmun Rev. 2005;4(3):130-6.
- Feinberg AP. Phenotypic plasticity and the epigenetics of human disease. Nature. 2007;447(7143):433-40.
- Bird A. DNA methylation patterns and epigenetic memory. Genes Dev. 2002;16(1):6-21.
- Chi P, Allis CD, Wang GG. Covalent histone modifications--miswritten, misinterpreted and mis-erased in human cancers. Nat Rev Cancer. 2010;10(7):457-69.
- Bartel DP. MicroRNAs: genomics, biogenesis, mechanism, and function. Cell. 2004;116(2):281-97.
- Richardson B. Primer: epigenetics of autoimmunity. Nat Clin Pract Rheumatol. 2003;3(9):521-7.
- Wada T, Kanwar YS. Identification and characterization of galactosyltransferase as the 100-kD autoantigen in autoimmune tubulointerstitial nephritis and uveitis. J Clin Invest. 1999;104(11):1559-66.
- Peeters JG, Buness A, Vossen RH, et al. HLA-class II restricted Foxp3+ Treg can be activated by cathepsin S-inhibited antigen presenting cells. J Autoimmun. 2011;36(2):99-109.
- Kaeberlein M, McVey M, Guarente L. The SIR2/3/4 complex and SIR2 alone promote longevity in Saccharomyces cerevisiae by two different mechanisms. Genes Dev. 1999;13(19):2570-80.
- Hsieh CL, Kowalski TJ, Staschke KA. Modulation of histone H3 lysine 4 methylation in double-strand break repair by checkpoint protein Rad9. Nucleic Acids Res. 2013;41(20):9313-27.
- Zhou Y, Qiu W, Xu H, et al. Histone modifications mediate the regulation of PTEN transcription by NFKB in human colon cancer cells. Br J Cancer. 2017;117(9):1215-24.
- Batista PJ, Chang HY. Long noncoding RNAs: cellular address codes in development and disease. Cell. 2013;152(6):1298-307.
- Guan H, Liang W, Xie Z, et al. MicroRNA-146a negatively regulates PTGS2 expression induced by Helicobacter pylori. Asian Pac J Cancer Prev. 2015;16(2):419-24.
- Ebert MS, Sharp PA. Roles for microRNAs in conferring robustness to biological processes. Cell. 2010;149(3):515-24.
- Esteller M. Epigenetics in cancer. N Engl J Med. 2008;358(11):1148-59.
- Weber M, Hellmann I, Stadler MB, et al. Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genome. Nat Genet. 2007;39(4):457-66.
- Zhu J, Yamane H, Paul WE. Differentiation of effector CD4 T cell populations (*Review*). Annu Rev Immunol. 2010;28:445-89.
- Jones PA, Baylin SB. The epigenomics of cancer. Cell. 2007;128(4):683-92.
- Issa JP. DNA methylation as a therapeutic target in cancer. Clin Cancer Res. 2007;13(6):1634-7.
- Makar KW, Wilson CB. DNA methylation is a nonredundant repressor of the Th2 effector program. J Immunol. 2004;173(7):4402-6.
- Cribbs AP, Kennedy A, Penn H, et al. The role of epigenetics in rheumatoid arthritis. Curr Opin Rheumatol. 2014;26(3):297-304.
- Karouzakis E, Gay RE, Gay S, Neidhart M. Epigenetic control in rheumatoid arthritis synovial fibroblasts. Nat Rev Rheumatol. 2009;5(5):266-72.
- Kondo T. Epigenetic alchemy for cell fate conversion. Curr Opin Genet Dev. 2009;19(5):481-6.
- Deaton AM, Bird A. CpG islands and the regulation of transcription. Genes Dev. 2011;25(10):1010-22.
- Tost J. DNA methylation: an introduction to the biology and the disease-associated changes of a promising biomarker. Mol Biotechnol. 2010;44(1):71-81.
- Smolen JS, Aletaha D, McInnes IB. Rheumatoid arthritis. Lancet. 2016;388(10055):2023-38.
- Jeffries MA, Sawalha AH. Autoimmune epigenetics: a perspective on the role of DNA methylation in systemic lupus erythematosus and rheumatoid arthritis. Arthritis Res Ther. 2015;17:35.
- Choi S, Reddy P. DNA methylation and histone modification: an epigenetic code for T cell aging and dysfunction. Exp Mol Med. 2011;43(8):488-94.
- Zhu H, Mi W, Luo H, et al. Whole-genome transcription and DNA methylation analysis of peripheral blood mononuclear cells in rheumatoid arthritis patients. Cell Mol Immunol. 2020;17(4):376-84.
- Lu Q. The critical importance of epigenetics in autoimmunity. J Autoimmun. 2013;41:1-5.
- Zhang X, Ho SM. Epigenetics meets endocrinology. J Mol Endocrinol. 2011;46(1):R11-32.
- Mehta P, Sahoo R, Sandireddy R, et al. Emerging role of epigenetics in the pathogenesis of rheumatoid arthritis. Semin Arthritis Rheum. 2017;47(2):164-74.
- Liu Y, Aryee MJ, Padyukov L, et al. Epigenome-wide association data implicate DNA methylation as an intermediary of genetic risk in rheumatoid arthritis. Nat Biotechnol. 2013;31(2):142-7.
- Prokunina-Olsson L, Alarcón-Riquelme ME. Regulatory SNPs in complex diseases: their identification and functional validation. Expert Rev Mol Med. 2004;6(12):1-15.
- Lee HS, Irizarry RA, Kim SC, et al. DNA methylation and gene expression profiles in rheumatoid arthritis. Am J Pathol. 2011;178(5):1797-807.
- de Andres MC, Takahashi A, Ochiai K, et al. DNA methylation analysis in cartilage diseases. Methods. 2014;72:66-74.
- Chuang JC, Jones PA. Epigenetics and microRNAs. Pediatr Res. 2007;61(5 Pt 2):24R-29R.
- Smith E, Croft M. Histone acetylation and gene transcriptional memory. Mol Cell Biol. 2009;29(15):4145-56.
- Wang J, Liu Y, Liu X, et al. Role of epigenetics in rheumatoid arthritis. Chin Med J (Engl). 2017;130(22):2718-24.
Rheumatoid arthritis, or RA, is a type of
chronic inflammatory disorder that is defined by
inflammation of the joints, pain, and joint degeneration.
Thus, although genetic predispositions play a role in RA
development, they are insufficient to explain differences
in the disease’s initiation and activity. Epigenomics,
referring to changes in the phenotype of a gene or group
of genes brought by modification of the DNA molecule
without altering its base sequence, offers important
information on RA’s multifactorial etiology. The present
article aimed at discussing the various epigenetic
features in RA such as DNA methylation, histone
modification, and non-coding RNA. These changes
include, hypomethylation of the pro-inflammatory genes
and hypermethylation of the anti-inflammatory genes
and this promotes inflammation in the body specifically
in RA. Other epigenetic abnormalities causing distortion
of disease pathology include dysregulated histone
modifications and non-coding RNAs. Knowledge of these
epigenetic changes have brought about the intervention
strategies in the form of epigenetic therapies.
Azacitidine, vorinostat and miRNA based therapies are
some of the classes of drugs which demonstrate efficacy
in preclinical and clinical trials. That nevertheless there
are some limitations that researchers are yet to embrace
regarding specificity, delivery, and the true interactions
between epigenetics. It is proposed that the further
research should be concentrated on the development of
precise or pharmacogenomic medicine approaches, the
combination of genetic and epigenetic aspects of the drug
treatment. In this context, the present review of the
epigenetic targets and therapies clearly brings out the
possibilities of im-proving RA management and the
quality of life of patients through epigenetic
interventions.
Keywords :
Rheumatoid Arthritis, Epigenetics, DNA Methylation, Histone Modifications, Non-Coding RNAs, Pro-Inflammatory Genes, Anti-Inflammatory Genes, DNA Methylation Inhibitors, Histone Deacetylase Inhibitors, miRNA-Based Therapies, Autoimmune Disease, Inflammation, Gene Expression, Personalized Medicine, Epigenetic Therapies.